minwoosun commited on
Commit
f21b31c
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verified ·
1 Parent(s): d54d01e

Update app.py

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Files changed (1) hide show
  1. app.py +3 -1
app.py CHANGED
@@ -44,17 +44,19 @@ def main(input_file_path, species):
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  from accelerate import Accelerator
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  # python eval_single_anndata.py --adata_path "./data/10k_pbmcs_proc.h5ad" --dir "./" --model_loc "minwoosun/uce-100m"
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- script_name = "/home/user/app/eval_single_anndata.py"
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  args = ["--adata_path", input_file_path, "--dir", "/home/user/app/UCE/", "--model_loc", "minwoosun/uce-100m"]
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  command = ["python", script_name] + args
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  try:
 
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  result = subprocess.run(command, capture_output=True, text=True, check=True)
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  print(result.stdout)
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  print(result.stderr)
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  except subprocess.CalledProcessError as e:
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  print(f"Error executing command: {e}")
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  ##############
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  # UMAP #
 
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  from accelerate import Accelerator
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  # python eval_single_anndata.py --adata_path "./data/10k_pbmcs_proc.h5ad" --dir "./" --model_loc "minwoosun/uce-100m"
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+ script_name = "/home/user/app/UCE/eval_single_anndata.py"
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  args = ["--adata_path", input_file_path, "--dir", "/home/user/app/UCE/", "--model_loc", "minwoosun/uce-100m"]
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  command = ["python", script_name] + args
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  try:
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+ print("---> RUNNING UCE")
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  result = subprocess.run(command, capture_output=True, text=True, check=True)
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  print(result.stdout)
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  print(result.stderr)
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  except subprocess.CalledProcessError as e:
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  print(f"Error executing command: {e}")
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+ print("---> FINSIH UCE")
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  ##############
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  # UMAP #